Files
PlanarianScanner/test_tube_scanner/planarian/views.py
T
2026-04-27 23:28:41 +02:00

211 lines
7.2 KiB
Python

# planarian/views.py
#import asyncio
import logging
from asgiref.sync import async_to_sync
from django.conf import settings
from django.contrib import messages
from django.http import HttpResponse, JsonResponse
from django.shortcuts import get_object_or_404, redirect #, render
from django.utils.translation import gettext_lazy as _
from django.views import View
from django.views.generic import FormView, ListView
from .forms import CsvImportForm, ExperimentConfigForm, ExportCsvForm
from .models import ExperimentConfig
from modules.planarian_metrics import ExperimentParams, ReductStoreClient
logger = logging.getLogger(__name__)
def _get_reduct_client() -> ReductStoreClient:
"""Instancie le client ReductStore depuis les settings Django."""
return ReductStoreClient(
url = getattr(settings, "REDUCTSTORE_URL", "http://localhost:8383"),
token = getattr(settings, "REDUCTSTORE_TOKEN", ""),
bucket = getattr(settings, "REDUCTSTORE_BUCKET", "planarian_metrics"),
)
# ---------------------------------------------------------------------------
# Vue : liste des configurations
# ---------------------------------------------------------------------------
class ExperimentConfigListView(ListView):
"""Liste toutes les configurations expériences."""
model = ExperimentConfig
template_name = "planarian/experiment_list.html"
context_object_name = "configs"
ordering = ["-created_at"]
# ---------------------------------------------------------------------------
# Vue : création / modification d'une configuration
# ---------------------------------------------------------------------------
class ExperimentConfigFormView(FormView):
"""Formulaire de saisie des paramètres d'une expérience."""
template_name = "planarian/experiment_form.html"
form_class = ExperimentConfigForm
def get_form(self, form_class=None):
pk = self.kwargs.get("pk")
if pk:
instance = get_object_or_404(ExperimentConfig, pk=pk)
return ExperimentConfigForm(self.request.POST or None, instance=instance)
return ExperimentConfigForm(self.request.POST or None)
def form_valid(self, form):
form.save()
messages.success(self.request, _("Configuration sauvegardée."))
return redirect("planarian:experiment-list")
# ---------------------------------------------------------------------------
# Vue : import CSV de paramètres
# ---------------------------------------------------------------------------
class ImportParamsView(FormView):
"""
Import de configurations d'expérience depuis un fichier CSV.
Une ligne CSV = un puits = un ExperimentConfig.
Colonnes CSV obligatoires : experiment, well, px_per_mm, fps
Toutes les autres colonnes correspondent aux champs du modèle.
"""
template_name = "planarian/import_params.html"
form_class = CsvImportForm
def form_valid(self, form):
rows = form.csv_rows
overwrite = form.cleaned_data["overwrite"]
created = 0
updated = 0
errors = 0
for row in rows:
try:
params = ExperimentParams.from_csv_row(row)
d = params.to_dict()
obj, is_new = ExperimentConfig.objects.get_or_create(
experiment = d["experiment"],
well = d["well"],
)
if is_new or overwrite:
for k, v in d.items():
if k not in ("experiment", "well") and hasattr(obj, k):
setattr(obj, k, v)
obj.save()
if is_new:
created += 1
else:
updated += 1
except Exception as e:
logger.warning(f"Ligne ignorée ({row}): {e}")
errors += 1
messages.success(
self.request,
_("Import terminé : %(c)d créés, %(u)d mis à jour, %(e)d erreurs.")
% {"c": created, "u": updated, "e": errors},
)
return redirect("planarian:experiment-list")
# ---------------------------------------------------------------------------
# Vue : export CSV depuis ReductStore
# ---------------------------------------------------------------------------
class ExportCsvView(FormView):
"""
Export des données de tracking depuis ReductStore vers un fichier CSV.
Retourne le fichier en téléchargement HTTP.
"""
template_name = "planarian/export_csv.html"
form_class = ExportCsvForm
def form_valid(self, form):
d = form.cleaned_data
@async_to_sync
async def _do_export():
client = _get_reduct_client()
await client.connect()
try:
csv_content, n = await client.export_csv_response(
experiment = d["experiment"],
well = d["well"],
planarian = d["planarian"],
record_type = d["record_type"],
start = d.get("start_dt"),
stop = d.get("stop_dt"),
)
finally:
await client.close()
return csv_content, n
csv_content, n = _do_export()
if not csv_content:
messages.warning(self.request, _("Aucune donnée trouvée."))
return self.form_invalid(form)
filename = (
f"{d['experiment']}_{d['well']}_planaire{d['planarian']}"
f"_{d['record_type']}.csv"
)
response = HttpResponse(csv_content, content_type="text/csv; charset=utf-8")
response["Content-Disposition"] = f'attachment; filename="{filename}"'
messages.success(self.request, _("%(n)d lignes exportées.") % {"n": n})
return response
# ---------------------------------------------------------------------------
# Vue API JSON : données de tracking (pour polling front-end)
# ---------------------------------------------------------------------------
class TrackingDataView(View):
"""
API JSON retournant les métriques de tracking d'un planaire.
Utilisable pour un affichage temps réel ou un graphe front-end.
GET /tracking-data/?experiment=X&well=Y&planarian=0&record_type=frame
"""
def get(self, request):
experiment = request.GET.get("experiment", "")
well = request.GET.get("well", "")
planarian = int(request.GET.get("planarian", 0))
record_type = request.GET.get("record_type", "frame")
if not experiment or not well:
return JsonResponse({"error": "experiment et well requis"}, status=400)
@async_to_sync
async def _fetch():
client = _get_reduct_client()
await client.connect()
try:
return await client.get_tracking_data(
experiment = experiment,
well = well,
planarian = planarian,
record_type = record_type,
)
finally:
await client.close()
records = _fetch()
return JsonResponse({"count": len(records), "records": records})