Files
PlanarianScanner/test_tube_scanner/scanner/multiwell.py
T
2026-04-21 00:19:37 +02:00

322 lines
9.9 KiB
Python

'''
Created on 20 avr. 2026
@author: denis
'''
import logging
import time
from django.utils.translation import gettext_lazy as _
from threading import Thread, Event
from django.utils import timezone
from django.utils.html import mark_safe
from modules import grbl
from . import models
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger(__name__)
class WellIterator:
"""Itérateur personnalisé pour naviguer dans les Wells"""
def __init__(self, wells_queryset):
self.wells = list(wells_queryset) # Convertir en liste
self.current_index = -1
self.total_count = len(self.wells)
def __iter__(self):
"""Permet d'utiliser l'itérateur dans une boucle for"""
return self
def __next__(self):
"""Retourne l'élément suivant"""
self.current_index += 1
if self.current_index >= self.total_count:
raise StopIteration
return self.wells[self.current_index]
def next(self):
"""Méthode next() pour avancer manuellement"""
if self.current_index + 1 < self.total_count:
self.current_index += 1
return self.wells[self.current_index]
raise StopIteration("Fin de la liste atteinte")
def previous(self):
"""Méthode previous() pour revenir en arrière"""
if self.current_index > 0:
self.current_index -= 1
return self.wells[self.current_index]
raise StopIteration("Début de la liste atteint")
def seek(self, index):
"""Méthode seek() pour sauter à un index spécifique"""
if 0 <= index < self.total_count:
self.current_index = index
return self.wells[index]
raise IndexError(f"Index {index} hors limites (0-{self.total_count - 1})")
def get_current(self):
"""Retourne l'élément courant"""
if -1 < self.current_index < self.total_count:
return self.wells[self.current_index]
return None
def reset(self):
"""Réinitialise l'itérateur au début"""
self.current_index = -1
class MultiWellManager:
def __init__(self, process):
self.process = process
self.cnc_controller = process.grbl
self.stop_playing = Event()
self.well_iterator = None
self.scanner = None
self.multiwel = None
self.set_default_values()
self.set_multiwell()
def set_default_values(self, feed=None, step=None, duration=None):
self._feed = feed or self.process.conf.calibration_default_feed
self._step = step or self.process.conf.calibration_default_step
self._duration = duration or self.process.conf.calibration_default_duration
def set_multiwell(self, position=None):
if position is None:
self.multiwell = models.MultiWell.objects.filter(default=True).first()
else:
self.multiwell = models.MultiWell.by_position(position)
wells = models.WellPostion.objects.filter(multiwell_id=self.multiwell.id).order_by('order').all()
self.well_iterator = WellIterator(wells)
self.position = self.multiwell.position
self._xbase = self.multiwell.xbase
self._ybase = self.multiwell.ybase
self._dx = self.multiwell.dx
self._dy = self.multiwell.dy
return self.multiwell.config()
def multiwell_buttons(self):
multiwells = []
multiwells.append('''<div class="w3-border well-btn">''')
for w in self.well_iterator:
multiwells.append(f"""<button class="w3-button well" value="{w.order}" onclick="goto_well(this)">{w.well.name}</button>""")
multiwells.append('''</div>''')
self.well_iterator.reset()
return mark_safe("\n".join(multiwells))
def _grid_scanning_capture(self, uuid, duration):
self.process.data.uuid = uuid
self.process.data.record = True
start = time.monotonic()
while not self.stop_playing.is_set():
if time.monotonic() - start > duration:
break
self.cnc_controller.wait_for(1.0)
logger.info(f"Arrêter l'enregistrement {uuid}")
self.process.data.record = False
self.process.data.uuid = None
def _grid_scanning(self, observation, xnext=0, ynext=0):
multiwell = observation.multiwell
wells = models.WellPostion.objects.filter(multiwell_id=multiwell.id).order_by('order').all()
self.stop_playing = Event()
for w in wells:
if self.stop_playing.is_set():
break
self.cnc_controller.move_to(w.x, w.y, feed=w.multiwell.feed)
uuid = f'{self.process.data.session}-{multiwell.position}-{w.well.name}'
self._grid_scanning_capture(uuid, multiwell.duration)
logger.info(f"Scan terminé — retour à l'origine (X={xnext:.1f} Y={ynext:.1f})")
self.cnc_controller.move_to(xnext, ynext, feed=multiwell.feed*2)
def _start_scanning(self, session, observations):
xynext = []
for obs in observations:
xynext.append((obs.multiwell.xbase, obs.multiwell.ybase))
xynext.append((0, 0))
pos = 1
self.process.data.session = session.id
started = timezone.now()
for obs in observations:
obs.started = timezone.now()
obs.save()
xnext, ynext = xynext[pos]
pos +=1
self._grid_scanning(obs, xnext=xnext, ynext=ynext)
obs.finished = timezone.now()
obs.save()
session.finished = timezone.now()
session.active = False
session.scanning_task.enabled = False
session.save()
logger.info(f"==== Session {session.name} terminée à {session.finished} après {session.finished - started} secondes.")
def halt_scanning(self):
self.process.data.record = False
return self.stop_playing.set()
def scanning(self, sid):
try:
session = models.Session.objects.get(pk=sid)
observations = models.SessionObservation.observation_by_session(sid)
Thread(target=self._start_scanning, args=(session, observations, ), daemon=True).start()
except Exception as e:
print("MultiWellManager::scan error", e)
def previous_well(self):
w = self.well_iterator.previous()
self.cnc_controller.move_to(w.x, w.y, feed=w.multiwell.feed)
return {"state": "previous", "msg": f">>> ({w.x}, {w.y})"}
def next_well(self):
w = self.well_iterator.next()
self.cnc_controller.move_to(w.x, w.y, feed=w.multiwell.feed)
return {"state": "next", "msg": f">>> ({w.x}, {w.y})"}
def goto_well(self, numwell):
w = self.well_iterator.seek(numwell)
self.cnc_controller.move_to(w.x, w.y, feed=w.multiwell.feed)
return {"state": "goto", "msg": f">>> ({w.x}, {w.y})"}
def set_well_position(self):
w = self.well_iterator.get_current()
w.x, w.y = self.cnc_controller.get_mpos()
w.save()
return {"state": "well_position", "msg": f">>> saved ({w.x}, {w.y})"}
def _scanning_test(self, xnext=0, ynext=0):
self.stop_playing = Event()
for w in self.well_iterator:
if self.stop_playing.is_set():
break
self.cnc_controller.move_to(w.x, w.y, feed=w.multiwell.feed)
start = time.monotonic()
while not self.stop_playing.is_set():
if time.monotonic() - start > self.duration:
break
self.cnc_controller.wait_for(1.0)
logger.info(f"Arrêter la simulation")
self.well_iterator.reset()
logger.info(f"Scan terminé — retour à l'origine (X={xnext:.1f} Y={ynext:.1f})")
self.cnc_controller.move_to(xnext, ynext, feed=self.multiwell.feed*2)
def scan_test(self):
Thread(target=self._scanning_test, daemon=True).start()
@property
def position(self):
return self._position
@position.setter
def position(self, value):
self._position = value
@property
def duration(self):
return self._duration
@duration.setter
def duration(self, value):
self._duration = value
@property
def step(self):
return self._step
@step.setter
def step(self, value):
self._step = value
@property
def feed(self):
return self._feed
@feed.setter
def feed(self, value):
self._feed = value
@property
def xbase(self):
return self._xbase
@xbase.setter
def xbase(self, value):
self._xbase = value
@property
def ybase(self):
return self._ybase
@ybase.setter
def ybase(self, value):
self._ybase = value
@property
def dx(self):
return self._dx
@dx.setter
def dx(self, value):
self._dx = value
@property
def dy(self):
return self._dy
@dy.setter
def dy(self, value):
self._dy = value
def set_xy_step(self):
models.MultiWell.objects.filter(position__exact=self.position).update(dx=self.dx, dy=self.dy)
def set_position(self):
x, y = self.cnc_controller.get_mpos()
self.cnc_controller.wait_for(2.0)
models.MultiWell.objects.filter(position__exact=self.position).update(xbase=x, ybase=y)
self._xbase, self._ybase = x, y
def calib_toggle_debug(self):
""" Active / désactive le mode debug sur le stream."""
aligner = self.process.cam._aligner
aligner.debug = not aligner.debug
return {"state": "debug", "msg": f"Debug: {aligner.debug}"}